From 462daaffd5ec720ed80a2e7b1f445a73cabf5833 Mon Sep 17 00:00:00 2001 From: Tavian Barnes Date: Sun, 19 Apr 2020 16:59:24 -0400 Subject: metric/approx: Implement approximate nearest neighbor search --- src/metric.rs | 1 + src/metric/approx.rs | 131 +++++++++++++++++++++++++++++++++++++++++++++++++++ 2 files changed, 132 insertions(+) create mode 100644 src/metric/approx.rs diff --git a/src/metric.rs b/src/metric.rs index b46c8da..268aefd 100644 --- a/src/metric.rs +++ b/src/metric.rs @@ -1,5 +1,6 @@ //! [Metric spaces](https://en.wikipedia.org/wiki/Metric_space). +pub mod approx; pub mod forest; pub mod kd; pub mod soft; diff --git a/src/metric/approx.rs b/src/metric/approx.rs new file mode 100644 index 0000000..c23f9c7 --- /dev/null +++ b/src/metric/approx.rs @@ -0,0 +1,131 @@ +//! [Approximate nearest neighbor search](https://en.wikipedia.org/wiki/Nearest_neighbor_search#Approximate_nearest_neighbor). + +use super::{Metric, NearestNeighbors, Neighborhood}; + +/// An approximate [Neighborhood], for approximate nearest neighbor searches. +#[derive(Debug)] +struct ApproximateNeighborhood { + inner: N, + ratio: f64, + limit: usize, +} + +impl ApproximateNeighborhood { + fn new(inner: N, ratio: f64, limit: usize) -> Self { + Self { + inner, + ratio, + limit, + } + } +} + +impl Neighborhood for ApproximateNeighborhood +where + U: Metric, + N: Neighborhood, +{ + fn target(&self) -> U { + self.inner.target() + } + + fn contains(&self, distance: f64) -> bool { + if self.limit > 0 { + self.inner.contains(self.ratio * distance) + } else { + false + } + } + + fn contains_distance(&self, distance: U::Distance) -> bool { + self.contains(self.ratio * distance.into()) + } + + fn consider(&mut self, item: T) -> U::Distance { + self.limit = self.limit.saturating_sub(1); + self.inner.consider(item) + } +} + +/// An [approximate nearest neighbor search](https://en.wikipedia.org/wiki/Nearest_neighbor_search#Approximate_nearest_neighbor) +/// index. +/// +/// This wrapper converts an exact nearest neighbor search algorithm into an approximate one by +/// modifying the behavior of [Neighborhood::contains]. The approximation is controlled by two +/// parameters: +/// +/// * `ratio`: The [nearest neighbor distance ratio](https://en.wikipedia.org/wiki/Nearest_neighbor_search#Nearest_neighbor_distance_ratio), +/// which controls how much closer new candidates must be to be considered. For example, a ratio +/// of 2.0 means that a neighbor must be less than half of the current threshold away to be +/// considered. A ratio of 1.0 means an exact search. +/// +/// * `limit`: A limit on the number of candidates to consider. Typical nearest neighbor algorithms +/// find a close match quickly, so setting a limit bounds the worst-case search time while keeping +/// good accuracy. +#[derive(Debug)] +pub struct ApproximateSearch { + inner: T, + ratio: f64, + limit: usize, +} + +impl ApproximateSearch { + /// Create a new ApproximateSearch index. + /// + /// * `inner`: The [NearestNeighbors] implementation to wrap. + /// * `ratio`: The nearest neighbor distance ratio. + /// * `limit`: The maximum number of results to consider. + pub fn new(inner: T, ratio: f64, limit: usize) -> Self { + Self { + inner, + ratio, + limit, + } + } +} + +impl NearestNeighbors for ApproximateSearch +where + U: Metric, + V: NearestNeighbors, +{ + fn search<'a, 'b, N>(&'a self, neighborhood: N) -> N + where + T: 'a, + U: 'b, + N: Neighborhood<&'a T, &'b U>, + { + self.inner + .search(ApproximateNeighborhood::new( + neighborhood, + self.ratio, + self.limit, + )) + .inner + } +} + +#[cfg(test)] +mod tests { + use super::*; + + use crate::metric::kd::KdTree; + use crate::metric::tests::test_nearest_neighbors; + use crate::metric::vp::VpTree; + + use std::iter::FromIterator; + + #[test] + fn test_approx_kd_tree() { + test_nearest_neighbors(|iter| { + ApproximateSearch::new(KdTree::from_iter(iter), 1.0, std::usize::MAX) + }); + } + + #[test] + fn test_approx_vp_tree() { + test_nearest_neighbors(|iter| { + ApproximateSearch::new(VpTree::from_iter(iter), 1.0, std::usize::MAX) + }); + } +} -- cgit v1.2.3